STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC99183.1Putative ABC transport system ATP-binding protein. (262 aa)    
Predicted Functional Partners:
SEC99151.1
Putative ABC transport system permease protein.
 
 0.995
SEC30981.1
Putative ABC transport system permease protein.
 
 0.982
SED79326.1
Putative ABC transport system permease protein.
 
 0.916
SEC98506.1
Putative ABC transport system permease protein.
 
 
 0.876
SED48258.1
FtsX-like permease family protein.
 
 0.864
SEE29258.1
Putative ABC transport system permease protein.
 
 
 0.841
SEE21569.1
Putative ABC transport system permease protein.
 0.803
SEC85397.1
FtsX-like permease family protein.
  
 0.797
SEE00532.1
Putative ABC transport system permease protein.
 
 0.778
SEB31772.1
Hypothetical protein.
  
 0.762
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.