Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SED02282.1Anti-anti-sigma factor. (113 aa)    
Predicted Functional Partners:
SED73752.1
Signal transduction histidine kinase.
  
 
 0.939
SEB96275.1
PAS domain S-box-containing protein.
  
 0.930
SEE14519.1
PAS domain S-box-containing protein.
  
 0.930
SEE18832.1
PAS domain S-box-containing protein.
  
 0.930
SED73718.1
PAS domain S-box-containing protein; Manually curated.
  
 0.919
SEC01215.1
Histidine kinase-like ATPase domain-containing protein.
  
 0.896
SEC14318.1
PAS domain S-box-containing protein.
  
 0.896
SEC97401.1
Histidine kinase-like ATPase domain-containing protein.
  
 0.896
SED80266.1
Anti-sigma regulatory factor (Ser/Thr protein kinase).
  
 0.896
SED91122.1
PAS fold.
  
 0.896
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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