Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SED53589.1ABC-2 type transport system ATP-binding protein. (316 aa)    
Predicted Functional Partners:
SED53622.1
ABC-2 type transport system permease protein.
 
 
  0.968
SED53665.1
Two-component system, NarL family, sensor histidine kinase DesK.
 
     0.907
SED53699.1
Two component transcriptional regulator, LuxR family.
 
     0.883
SEC72681.1
ABC-2 type transport system permease protein.
 
 
  0.862
SEB30994.1
ABC-2 type transport system permease protein.
  
 
  0.853
SED19765.1
ATP-binding cassette, subfamily C, CydCD.
     
  0.675
SED10868.1
ABC-2 type transport system permease protein.
  
 
 0.663
SEC58210.1
ABC-2 type transport system permease protein.
  
 
  0.585
SED53557.1
Hypothetical protein.
       0.547
SED64717.1
ABC-2 type transport system permease protein.
  
 
  0.530
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.