STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED86214.1DNA-binding transcriptional regulator, GntR family. (269 aa)    
Predicted Functional Partners:
SEC26939.1
Glycine/D-amino acid oxidase.
  
 0.893
SEC26770.1
Proline racemase; Belongs to the proline racemase family.
 
   
 0.804
SEC26891.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
 
    0.751
SEC48641.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.694
SEC26797.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
 
     0.662
SEC36894.1
DNA-binding transcriptional regulator, GntR family.
  
     0.637
SEC13228.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.635
SED82167.1
DNA-binding transcriptional regulator, FadR family.
  
  
 0.622
SED86192.1
Protein of unknown function.
       0.584
ilvN
Acetolactate synthase, small subunit.
   
    0.487
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
Server load: low (14%) [HD]