STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SED98658.1Lysophospholipase L1. (445 aa)    
Predicted Functional Partners:
SED98697.1
Glycosyl hydrolase family 115.
 
 
   0.944
SEE20026.1
Endoglucanase.
 
 0.769
SED87591.1
Esterase, PHB depolymerase family.
 
 0.756
SED97724.1
Ricin-type beta-trefoil lectin domain-containing protein.
  
 
   0.756
SEB78181.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.735
SED91179.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.733
SEE07514.1
Fibronectin type III domain-containing protein.
 
 0.731
SEE11760.1
Ricin-type beta-trefoil lectin domain-containing protein.
  
     0.731
SED32912.1
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
     0.727
SED97627.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
  
  
  0.724
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.