Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEC55727.1 | SEE12609.1 | SAMN04490357_2292 | SAMN04490357_7003 | Protoporphyrin IX magnesium-chelatase. | MoxR-like ATPase. | 0.650 |
SEC91022.1 | SEE12609.1 | SAMN04490357_3230 | SAMN04490357_7003 | Hypothetical protein. | MoxR-like ATPase. | 0.524 |
SEE12546.1 | SEE12577.1 | SAMN04490357_7001 | SAMN04490357_7002 | D-cysteine desulfhydrase. | Hypothetical protein. | 0.786 |
SEE12546.1 | SEE12609.1 | SAMN04490357_7001 | SAMN04490357_7003 | D-cysteine desulfhydrase. | MoxR-like ATPase. | 0.581 |
SEE12546.1 | SEE12637.1 | SAMN04490357_7001 | SAMN04490357_7004 | D-cysteine desulfhydrase. | DNA-binding transcriptional regulator, AcrR family. | 0.469 |
SEE12577.1 | SEE12546.1 | SAMN04490357_7002 | SAMN04490357_7001 | Hypothetical protein. | D-cysteine desulfhydrase. | 0.786 |
SEE12577.1 | SEE12609.1 | SAMN04490357_7002 | SAMN04490357_7003 | Hypothetical protein. | MoxR-like ATPase. | 0.955 |
SEE12577.1 | SEE12637.1 | SAMN04490357_7002 | SAMN04490357_7004 | Hypothetical protein. | DNA-binding transcriptional regulator, AcrR family. | 0.795 |
SEE12609.1 | SEC55727.1 | SAMN04490357_7003 | SAMN04490357_2292 | MoxR-like ATPase. | Protoporphyrin IX magnesium-chelatase. | 0.650 |
SEE12609.1 | SEC91022.1 | SAMN04490357_7003 | SAMN04490357_3230 | MoxR-like ATPase. | Hypothetical protein. | 0.524 |
SEE12609.1 | SEE12546.1 | SAMN04490357_7003 | SAMN04490357_7001 | MoxR-like ATPase. | D-cysteine desulfhydrase. | 0.581 |
SEE12609.1 | SEE12577.1 | SAMN04490357_7003 | SAMN04490357_7002 | MoxR-like ATPase. | Hypothetical protein. | 0.955 |
SEE12609.1 | SEE12637.1 | SAMN04490357_7003 | SAMN04490357_7004 | MoxR-like ATPase. | DNA-binding transcriptional regulator, AcrR family. | 0.598 |
SEE12609.1 | SEE15834.1 | SAMN04490357_7003 | SAMN04490357_7113 | MoxR-like ATPase. | Carbon monoxide dehydrogenase subunit G. | 0.562 |
SEE12609.1 | SEE15868.1 | SAMN04490357_7003 | SAMN04490357_7114 | MoxR-like ATPase. | Hypothetical protein. | 0.794 |
SEE12609.1 | SEE15926.1 | SAMN04490357_7003 | SAMN04490357_7116 | MoxR-like ATPase. | Carbon-monoxide dehydrogenase medium subunit. | 0.529 |
SEE12609.1 | SEE15961.1 | SAMN04490357_7003 | SAMN04490357_7117 | MoxR-like ATPase. | Carbon-monoxide dehydrogenase large subunit. | 0.615 |
SEE12609.1 | SEE19071.1 | SAMN04490357_7003 | SAMN04490357_7225 | MoxR-like ATPase. | Arginine/lysine/ornithine decarboxylase. | 0.503 |
SEE12637.1 | SEE12546.1 | SAMN04490357_7004 | SAMN04490357_7001 | DNA-binding transcriptional regulator, AcrR family. | D-cysteine desulfhydrase. | 0.469 |
SEE12637.1 | SEE12577.1 | SAMN04490357_7004 | SAMN04490357_7002 | DNA-binding transcriptional regulator, AcrR family. | Hypothetical protein. | 0.795 |
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