STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE12609.1MoxR-like ATPase. (285 aa)    
Predicted Functional Partners:
SEE12577.1
Hypothetical protein.
 
    0.955
SEE15868.1
Hypothetical protein.
 
     0.794
SEC55727.1
Protoporphyrin IX magnesium-chelatase.
  
 
 0.650
SEE15961.1
Carbon-monoxide dehydrogenase large subunit.
 
     0.615
SEE12637.1
DNA-binding transcriptional regulator, AcrR family.
       0.598
SEE12546.1
D-cysteine desulfhydrase.
       0.581
SEE15834.1
Carbon monoxide dehydrogenase subunit G.
 
  
 0.562
SEE15926.1
Carbon-monoxide dehydrogenase medium subunit.
 
     0.529
SEC91022.1
Hypothetical protein.
    
 0.524
SEE19071.1
Arginine/lysine/ornithine decarboxylase.
   
 
 0.503
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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