STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEE16814.1DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains. (305 aa)    
Predicted Functional Partners:
SED07011.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
  
 
 0.797
SEE16783.1
Hypothetical protein.
       0.738
SED37118.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
  0.696
SED75639.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
  0.696
SEE16842.1
ArgK protein.
  
    0.679
SEC35993.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
  
 
 0.526
SED02319.1
Nucleotidyl transferase.
  
 
 0.526
SEE16871.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/beta-phosphoglucomutase family hydrolase.
  
    0.514
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.512
SEC96179.1
Phospho-glucose isomerase C-terminal SIS domain-containing protein.
    
 0.512
Your Current Organism:
Streptomyces misionensis
NCBI taxonomy Id: 67331
Other names: ATCC 14991, ATCC 25475, BCRC 12094, CBS 885.69, CCRC 12094, CCRC:12094, DSM 40306, IFO 13063, ISP 5306, JCM 4497, NBRC 13063, NRRL B-3230, NRRL-ISP 5306, S. misionensis, Streptomyces misionesensis, VKM Ac-626
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