Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAMN05216505_1011029 | glmM | SAMN05216505_1011029 | SAMN05216505_103403 | Nucleotide-binding protein SAMN05216505_1011029; Displays ATPase and GTPase activities. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.723 |
SAMN05216505_1011029 | glmU | SAMN05216505_1011029 | SAMN05216505_104393 | Nucleotide-binding protein SAMN05216505_1011029; Displays ATPase and GTPase activities. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.534 |
SAMN05216505_101326 | SAMN05216505_104138 | SAMN05216505_101326 | SAMN05216505_104138 | BadF-type ATPase. | N-acetylglucosamine-6-phosphate deacetylase. | 0.838 |
SAMN05216505_101326 | SAMN05216505_105199 | SAMN05216505_101326 | SAMN05216505_105199 | BadF-type ATPase. | BadF-type ATPase. | 0.695 |
SAMN05216505_101326 | glmM | SAMN05216505_101326 | SAMN05216505_103403 | BadF-type ATPase. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.788 |
SAMN05216505_101326 | glmS | SAMN05216505_101326 | SAMN05216505_101192 | BadF-type ATPase. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.716 |
SAMN05216505_101326 | glmS-2 | SAMN05216505_101326 | SAMN05216505_103399 | BadF-type ATPase. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.716 |
SAMN05216505_101326 | nagB | SAMN05216505_101326 | SAMN05216505_11053 | BadF-type ATPase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.809 |
SAMN05216505_104138 | SAMN05216505_101326 | SAMN05216505_104138 | SAMN05216505_101326 | N-acetylglucosamine-6-phosphate deacetylase. | BadF-type ATPase. | 0.838 |
SAMN05216505_104138 | SAMN05216505_105199 | SAMN05216505_104138 | SAMN05216505_105199 | N-acetylglucosamine-6-phosphate deacetylase. | BadF-type ATPase. | 0.892 |
SAMN05216505_104138 | glmM | SAMN05216505_104138 | SAMN05216505_103403 | N-acetylglucosamine-6-phosphate deacetylase. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.976 |
SAMN05216505_104138 | glmS | SAMN05216505_104138 | SAMN05216505_101192 | N-acetylglucosamine-6-phosphate deacetylase. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.871 |
SAMN05216505_104138 | glmS-2 | SAMN05216505_104138 | SAMN05216505_103399 | N-acetylglucosamine-6-phosphate deacetylase. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.871 |
SAMN05216505_104138 | glmU | SAMN05216505_104138 | SAMN05216505_104393 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.403 |
SAMN05216505_104138 | nagB | SAMN05216505_104138 | SAMN05216505_11053 | N-acetylglucosamine-6-phosphate deacetylase. | Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily. | 0.999 |
SAMN05216505_104138 | pgi | SAMN05216505_104138 | SAMN05216505_1011037 | N-acetylglucosamine-6-phosphate deacetylase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.596 |
SAMN05216505_105199 | SAMN05216505_101326 | SAMN05216505_105199 | SAMN05216505_101326 | BadF-type ATPase. | BadF-type ATPase. | 0.695 |
SAMN05216505_105199 | SAMN05216505_104138 | SAMN05216505_105199 | SAMN05216505_104138 | BadF-type ATPase. | N-acetylglucosamine-6-phosphate deacetylase. | 0.892 |
SAMN05216505_105199 | glmM | SAMN05216505_105199 | SAMN05216505_103403 | BadF-type ATPase. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.788 |
SAMN05216505_105199 | glmS | SAMN05216505_105199 | SAMN05216505_101192 | BadF-type ATPase. | Glutamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.717 |
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