Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAMN05216505_1011175 | SAMN05216505_103563 | SAMN05216505_1011175 | SAMN05216505_103563 | SPFH domain, Band 7 family protein. | Rhomboid family protein. | 0.646 |
SAMN05216505_1011175 | ftsH | SAMN05216505_1011175 | SAMN05216505_109157 | SPFH domain, Band 7 family protein. | ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family. | 0.974 |
SAMN05216505_101665 | SAMN05216505_103563 | SAMN05216505_101665 | SAMN05216505_103563 | N-acetylmuramoyl-L-alanine amidase. | Rhomboid family protein. | 0.770 |
SAMN05216505_103559 | SAMN05216505_103561 | SAMN05216505_103559 | SAMN05216505_103561 | Ribosomal protein S18 acetylase RimI. | Transcriptional regulator, AsnC family. | 0.750 |
SAMN05216505_103559 | SAMN05216505_103562 | SAMN05216505_103559 | SAMN05216505_103562 | Ribosomal protein S18 acetylase RimI. | 4-hydroxy-3-polyprenylbenzoate decarboxylase. | 0.614 |
SAMN05216505_103559 | SAMN05216505_103563 | SAMN05216505_103559 | SAMN05216505_103563 | Ribosomal protein S18 acetylase RimI. | Rhomboid family protein. | 0.655 |
SAMN05216505_103559 | mqnE | SAMN05216505_103559 | SAMN05216505_103560 | Ribosomal protein S18 acetylase RimI. | Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.862 |
SAMN05216505_103561 | SAMN05216505_103559 | SAMN05216505_103561 | SAMN05216505_103559 | Transcriptional regulator, AsnC family. | Ribosomal protein S18 acetylase RimI. | 0.750 |
SAMN05216505_103561 | SAMN05216505_103562 | SAMN05216505_103561 | SAMN05216505_103562 | Transcriptional regulator, AsnC family. | 4-hydroxy-3-polyprenylbenzoate decarboxylase. | 0.774 |
SAMN05216505_103561 | SAMN05216505_103563 | SAMN05216505_103561 | SAMN05216505_103563 | Transcriptional regulator, AsnC family. | Rhomboid family protein. | 0.698 |
SAMN05216505_103561 | mqnE | SAMN05216505_103561 | SAMN05216505_103560 | Transcriptional regulator, AsnC family. | Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.757 |
SAMN05216505_103562 | SAMN05216505_103559 | SAMN05216505_103562 | SAMN05216505_103559 | 4-hydroxy-3-polyprenylbenzoate decarboxylase. | Ribosomal protein S18 acetylase RimI. | 0.614 |
SAMN05216505_103562 | SAMN05216505_103561 | SAMN05216505_103562 | SAMN05216505_103561 | 4-hydroxy-3-polyprenylbenzoate decarboxylase. | Transcriptional regulator, AsnC family. | 0.774 |
SAMN05216505_103562 | SAMN05216505_103563 | SAMN05216505_103562 | SAMN05216505_103563 | 4-hydroxy-3-polyprenylbenzoate decarboxylase. | Rhomboid family protein. | 0.754 |
SAMN05216505_103562 | mqnE | SAMN05216505_103562 | SAMN05216505_103560 | 4-hydroxy-3-polyprenylbenzoate decarboxylase. | Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate. | 0.946 |
SAMN05216505_103563 | SAMN05216505_1011175 | SAMN05216505_103563 | SAMN05216505_1011175 | Rhomboid family protein. | SPFH domain, Band 7 family protein. | 0.646 |
SAMN05216505_103563 | SAMN05216505_101665 | SAMN05216505_103563 | SAMN05216505_101665 | Rhomboid family protein. | N-acetylmuramoyl-L-alanine amidase. | 0.770 |
SAMN05216505_103563 | SAMN05216505_103559 | SAMN05216505_103563 | SAMN05216505_103559 | Rhomboid family protein. | Ribosomal protein S18 acetylase RimI. | 0.655 |
SAMN05216505_103563 | SAMN05216505_103561 | SAMN05216505_103563 | SAMN05216505_103561 | Rhomboid family protein. | Transcriptional regulator, AsnC family. | 0.698 |
SAMN05216505_103563 | SAMN05216505_103562 | SAMN05216505_103563 | SAMN05216505_103562 | Rhomboid family protein. | 4-hydroxy-3-polyprenylbenzoate decarboxylase. | 0.754 |
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