Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SAMN05216505_101944 | SAMN05216505_104151 | SAMN05216505_101944 | SAMN05216505_104151 | Glutamate synthase (NADPH/NADH) large chain. | Uncharacterized protein. | 0.551 |
SAMN05216505_101944 | SAMN05216505_104314 | SAMN05216505_101944 | SAMN05216505_104314 | Glutamate synthase (NADPH/NADH) large chain. | PTS system, fructose-specific IIC component. | 0.434 |
SAMN05216505_101944 | SAMN05216505_10848 | SAMN05216505_101944 | SAMN05216505_10848 | Glutamate synthase (NADPH/NADH) large chain. | Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.688 |
SAMN05216505_101944 | SAMN05216505_1085 | SAMN05216505_101944 | SAMN05216505_1085 | Glutamate synthase (NADPH/NADH) large chain. | Histidine kinase. | 0.957 |
SAMN05216505_101944 | SAMN05216505_11048 | SAMN05216505_101944 | SAMN05216505_11048 | Glutamate synthase (NADPH/NADH) large chain. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.688 |
SAMN05216505_101944 | SAMN05216505_11390 | SAMN05216505_101944 | SAMN05216505_11390 | Glutamate synthase (NADPH/NADH) large chain. | Acyl transferase domain-containing protein. | 0.949 |
SAMN05216505_101944 | SAMN05216505_11391 | SAMN05216505_101944 | SAMN05216505_11391 | Glutamate synthase (NADPH/NADH) large chain. | Amino acid adenylation domain-containing protein. | 0.949 |
SAMN05216505_101944 | tmk | SAMN05216505_101944 | SAMN05216505_109118 | Glutamate synthase (NADPH/NADH) large chain. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.443 |
SAMN05216505_104151 | SAMN05216505_101944 | SAMN05216505_104151 | SAMN05216505_101944 | Uncharacterized protein. | Glutamate synthase (NADPH/NADH) large chain. | 0.551 |
SAMN05216505_104151 | SAMN05216505_104314 | SAMN05216505_104151 | SAMN05216505_104314 | Uncharacterized protein. | PTS system, fructose-specific IIC component. | 0.543 |
SAMN05216505_104151 | SAMN05216505_10848 | SAMN05216505_104151 | SAMN05216505_10848 | Uncharacterized protein. | Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | 0.528 |
SAMN05216505_104151 | SAMN05216505_1085 | SAMN05216505_104151 | SAMN05216505_1085 | Uncharacterized protein. | Histidine kinase. | 0.537 |
SAMN05216505_104151 | SAMN05216505_11048 | SAMN05216505_104151 | SAMN05216505_11048 | Uncharacterized protein. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.528 |
SAMN05216505_104151 | SAMN05216505_11390 | SAMN05216505_104151 | SAMN05216505_11390 | Uncharacterized protein. | Acyl transferase domain-containing protein. | 0.578 |
SAMN05216505_104151 | SAMN05216505_11391 | SAMN05216505_104151 | SAMN05216505_11391 | Uncharacterized protein. | Amino acid adenylation domain-containing protein. | 0.578 |
SAMN05216505_104151 | dut | SAMN05216505_104151 | SAMN05216505_108121 | Uncharacterized protein. | Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.590 |
SAMN05216505_104151 | ndk | SAMN05216505_104151 | SAMN05216505_101386 | Uncharacterized protein. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.594 |
SAMN05216505_104151 | tmk | SAMN05216505_104151 | SAMN05216505_109118 | Uncharacterized protein. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.632 |
SAMN05216505_104314 | SAMN05216505_101944 | SAMN05216505_104314 | SAMN05216505_101944 | PTS system, fructose-specific IIC component. | Glutamate synthase (NADPH/NADH) large chain. | 0.434 |
SAMN05216505_104314 | SAMN05216505_104151 | SAMN05216505_104314 | SAMN05216505_104151 | PTS system, fructose-specific IIC component. | Uncharacterized protein. | 0.543 |
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