Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SAMN05216505_102220 | SAMN05216505_104464 | Uncharacterized protein. | annotation not available | 0.529 |
SAMN05216505_102220 | SAMN05216505_12056 | Uncharacterized protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.562 |
SAMN05216505_102589 | SAMN05216505_104464 | Creatinine amidohydrolase. | annotation not available | 0.816 |
SAMN05216505_10278 | SAMN05216505_104464 | NB-ARC domain-containing protein. | annotation not available | 0.541 |
SAMN05216505_10278 | SAMN05216505_12056 | NB-ARC domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.641 |
SAMN05216505_103125 | SAMN05216505_104464 | TIR domain-containing protein. | annotation not available | 0.529 |
SAMN05216505_103125 | SAMN05216505_12056 | TIR domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.562 |
SAMN05216505_103203 | SAMN05216505_104254 | Dolichol-phosphate mannosyltransferase. | Tetratricopeptide (TPR) repeat. | 0.486 |
SAMN05216505_103203 | SAMN05216505_104464 | Dolichol-phosphate mannosyltransferase. | annotation not available | 0.548 |
SAMN05216505_104254 | SAMN05216505_103203 | Tetratricopeptide (TPR) repeat. | Dolichol-phosphate mannosyltransferase. | 0.486 |
SAMN05216505_104254 | SAMN05216505_104464 | Tetratricopeptide (TPR) repeat. | annotation not available | 0.624 |
SAMN05216505_104254 | SAMN05216505_12056 | Tetratricopeptide (TPR) repeat. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.734 |
SAMN05216505_104464 | SAMN05216505_102220 | annotation not available | Uncharacterized protein. | 0.529 |
SAMN05216505_104464 | SAMN05216505_102589 | annotation not available | Creatinine amidohydrolase. | 0.816 |
SAMN05216505_104464 | SAMN05216505_10278 | annotation not available | NB-ARC domain-containing protein. | 0.541 |
SAMN05216505_104464 | SAMN05216505_103125 | annotation not available | TIR domain-containing protein. | 0.529 |
SAMN05216505_104464 | SAMN05216505_103203 | annotation not available | Dolichol-phosphate mannosyltransferase. | 0.548 |
SAMN05216505_104464 | SAMN05216505_104254 | annotation not available | Tetratricopeptide (TPR) repeat. | 0.624 |
SAMN05216505_104464 | SAMN05216505_104465 | annotation not available | Transcriptional attenuator, LytR family. | 0.722 |
SAMN05216505_104464 | SAMN05216505_12056 | annotation not available | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.787 |
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