Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SAMN05216505_10139 | SAMN05216505_101426 | Putative zinc-finger. | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | 0.551 |
SAMN05216505_10139 | SAMN05216505_101765 | Putative zinc-finger. | DUF1996 domain-containing protein. | 0.708 |
SAMN05216505_10139 | SAMN05216505_105192 | Putative zinc-finger. | Predicted outer membrane protein. | 0.678 |
SAMN05216505_10139 | SAMN05216505_106354 | Putative zinc-finger. | Uncharacterized protein. | 0.493 |
SAMN05216505_10139 | SAMN05216505_113138 | Putative zinc-finger. | DUF1996 domain-containing protein. | 0.715 |
SAMN05216505_101426 | SAMN05216505_10139 | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | Putative zinc-finger. | 0.551 |
SAMN05216505_101426 | SAMN05216505_101765 | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | DUF1996 domain-containing protein. | 0.620 |
SAMN05216505_101426 | SAMN05216505_105192 | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | Predicted outer membrane protein. | 0.679 |
SAMN05216505_101426 | SAMN05216505_106354 | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | Uncharacterized protein. | 0.689 |
SAMN05216505_101426 | SAMN05216505_113138 | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | DUF1996 domain-containing protein. | 0.635 |
SAMN05216505_101493 | SAMN05216505_101765 | Phosphoglycerol transferase MdoB. | DUF1996 domain-containing protein. | 0.499 |
SAMN05216505_101493 | SAMN05216505_102587 | Phosphoglycerol transferase MdoB. | Methyltransferase domain-containing protein. | 0.796 |
SAMN05216505_101493 | SAMN05216505_105192 | Phosphoglycerol transferase MdoB. | Predicted outer membrane protein. | 0.626 |
SAMN05216505_101493 | SAMN05216505_113138 | Phosphoglycerol transferase MdoB. | DUF1996 domain-containing protein. | 0.521 |
SAMN05216505_101765 | SAMN05216505_10139 | DUF1996 domain-containing protein. | Putative zinc-finger. | 0.708 |
SAMN05216505_101765 | SAMN05216505_101426 | DUF1996 domain-containing protein. | DMSO/TMAO reductase YedYZ, heme-binding membrane subunit. | 0.620 |
SAMN05216505_101765 | SAMN05216505_101493 | DUF1996 domain-containing protein. | Phosphoglycerol transferase MdoB. | 0.499 |
SAMN05216505_101765 | SAMN05216505_102125 | DUF1996 domain-containing protein. | Uncharacterized protein. | 0.466 |
SAMN05216505_101765 | SAMN05216505_102587 | DUF1996 domain-containing protein. | Methyltransferase domain-containing protein. | 0.487 |
SAMN05216505_101765 | SAMN05216505_105192 | DUF1996 domain-containing protein. | Predicted outer membrane protein. | 0.800 |
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