Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SAMN05216505_101944 | SAMN05216505_105316 | Glutamate synthase (NADPH/NADH) large chain. | 2,4-dienoyl-CoA reductase (NADPH2). | 0.999 |
SAMN05216505_101944 | SAMN05216505_108174 | Glutamate synthase (NADPH/NADH) large chain. | NAD(P)H-flavin reductase; Belongs to the globin family. | 0.907 |
SAMN05216505_101944 | SAMN05216505_11286 | Glutamate synthase (NADPH/NADH) large chain. | Ferredoxin-NADP reductase. | 0.452 |
SAMN05216505_101944 | SAMN05216505_11390 | Glutamate synthase (NADPH/NADH) large chain. | Acyl transferase domain-containing protein. | 0.949 |
SAMN05216505_101944 | SAMN05216505_11391 | Glutamate synthase (NADPH/NADH) large chain. | Amino acid adenylation domain-containing protein. | 0.949 |
SAMN05216505_101944 | SAMN05216505_114154 | Glutamate synthase (NADPH/NADH) large chain. | Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.452 |
SAMN05216505_101944 | SAMN05216505_1162 | Glutamate synthase (NADPH/NADH) large chain. | Polyketide synthase PksN. | 0.945 |
SAMN05216505_101944 | SAMN05216505_1164 | Glutamate synthase (NADPH/NADH) large chain. | Glycine C-acetyltransferase. | 0.974 |
SAMN05216505_105220 | SAMN05216505_105221 | Electron transfer flavoprotein beta subunit. | Electron transfer flavoprotein alpha subunit apoprotein. | 0.999 |
SAMN05216505_105220 | SAMN05216505_105316 | Electron transfer flavoprotein beta subunit. | 2,4-dienoyl-CoA reductase (NADPH2). | 0.999 |
SAMN05216505_105220 | SAMN05216505_11286 | Electron transfer flavoprotein beta subunit. | Ferredoxin-NADP reductase. | 0.421 |
SAMN05216505_105220 | SAMN05216505_11390 | Electron transfer flavoprotein beta subunit. | Acyl transferase domain-containing protein. | 0.679 |
SAMN05216505_105220 | SAMN05216505_11391 | Electron transfer flavoprotein beta subunit. | Amino acid adenylation domain-containing protein. | 0.679 |
SAMN05216505_105220 | SAMN05216505_114154 | Electron transfer flavoprotein beta subunit. | Ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. | 0.421 |
SAMN05216505_105220 | SAMN05216505_1162 | Electron transfer flavoprotein beta subunit. | Polyketide synthase PksN. | 0.655 |
SAMN05216505_105220 | SAMN05216505_1164 | Electron transfer flavoprotein beta subunit. | Glycine C-acetyltransferase. | 0.773 |
SAMN05216505_105221 | SAMN05216505_105220 | Electron transfer flavoprotein alpha subunit apoprotein. | Electron transfer flavoprotein beta subunit. | 0.999 |
SAMN05216505_105221 | SAMN05216505_105316 | Electron transfer flavoprotein alpha subunit apoprotein. | 2,4-dienoyl-CoA reductase (NADPH2). | 0.984 |
SAMN05216505_105221 | SAMN05216505_11390 | Electron transfer flavoprotein alpha subunit apoprotein. | Acyl transferase domain-containing protein. | 0.739 |
SAMN05216505_105221 | SAMN05216505_11391 | Electron transfer flavoprotein alpha subunit apoprotein. | Amino acid adenylation domain-containing protein. | 0.739 |
page 1 of 5