Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SAMN05216505_101116 | SAMN05216505_106130 | Uncharacterized protein. | Erythromycin esterase homolog. | 0.433 |
SAMN05216505_102187 | SAMN05216505_106129 | Chitin-binding protein. | DNA-binding transcriptional regulator, MerR family. | 0.487 |
SAMN05216505_102187 | SAMN05216505_106130 | Chitin-binding protein. | Erythromycin esterase homolog. | 0.432 |
SAMN05216505_103569 | SAMN05216505_106130 | DNA-binding transcriptional regulator, MerR family. | Erythromycin esterase homolog. | 0.465 |
SAMN05216505_104137 | SAMN05216505_106130 | Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | Erythromycin esterase homolog. | 0.531 |
SAMN05216505_104137 | SAMN05216505_113145 | Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | Uncharacterized protein. | 0.537 |
SAMN05216505_104137 | SAMN05216505_11987 | Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | Uncharacterized protein. | 0.796 |
SAMN05216505_104312 | SAMN05216505_106130 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | Erythromycin esterase homolog. | 0.531 |
SAMN05216505_104312 | SAMN05216505_113145 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | Uncharacterized protein. | 0.537 |
SAMN05216505_104312 | SAMN05216505_11987 | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | Uncharacterized protein. | 0.796 |
SAMN05216505_106129 | SAMN05216505_102187 | DNA-binding transcriptional regulator, MerR family. | Chitin-binding protein. | 0.487 |
SAMN05216505_106129 | SAMN05216505_106130 | DNA-binding transcriptional regulator, MerR family. | Erythromycin esterase homolog. | 0.881 |
SAMN05216505_10613 | SAMN05216505_106130 | Streptogrisin A/streptogrisin B. | Erythromycin esterase homolog. | 0.449 |
SAMN05216505_106130 | SAMN05216505_101116 | Erythromycin esterase homolog. | Uncharacterized protein. | 0.433 |
SAMN05216505_106130 | SAMN05216505_102187 | Erythromycin esterase homolog. | Chitin-binding protein. | 0.432 |
SAMN05216505_106130 | SAMN05216505_103569 | Erythromycin esterase homolog. | DNA-binding transcriptional regulator, MerR family. | 0.465 |
SAMN05216505_106130 | SAMN05216505_104137 | Erythromycin esterase homolog. | Tagatose 6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. | 0.531 |
SAMN05216505_106130 | SAMN05216505_104312 | Erythromycin esterase homolog. | 1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.531 |
SAMN05216505_106130 | SAMN05216505_106129 | Erythromycin esterase homolog. | DNA-binding transcriptional regulator, MerR family. | 0.881 |
SAMN05216505_106130 | SAMN05216505_10613 | Erythromycin esterase homolog. | Streptogrisin A/streptogrisin B. | 0.449 |
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