Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SAMN05216505_10231 | SAMN05216505_11095 | 3-hydroxyacyl-CoA dehydrogenase. | Signal transduction histidine kinase. | 0.408 |
SAMN05216505_10231 | SAMN05216505_11097 | 3-hydroxyacyl-CoA dehydrogenase. | Uncharacterized protein. | 0.849 |
SAMN05216505_10231 | SAMN05216505_1152 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.705 |
SAMN05216505_10231 | SAMN05216505_1232 | 3-hydroxyacyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.702 |
SAMN05216505_104205 | SAMN05216505_11095 | Signal recognition particle receptor subunit beta, a GTPase. | Signal transduction histidine kinase. | 0.684 |
SAMN05216505_104205 | SAMN05216505_11096 | Signal recognition particle receptor subunit beta, a GTPase. | Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family. | 0.918 |
SAMN05216505_104205 | SAMN05216505_11097 | Signal recognition particle receptor subunit beta, a GTPase. | Uncharacterized protein. | 0.840 |
SAMN05216505_104205 | SAMN05216505_1261 | Signal recognition particle receptor subunit beta, a GTPase. | Uncharacterized protein. | 0.769 |
SAMN05216505_11095 | SAMN05216505_10231 | Signal transduction histidine kinase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.408 |
SAMN05216505_11095 | SAMN05216505_104205 | Signal transduction histidine kinase. | Signal recognition particle receptor subunit beta, a GTPase. | 0.684 |
SAMN05216505_11095 | SAMN05216505_11096 | Signal transduction histidine kinase. | Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family. | 0.969 |
SAMN05216505_11095 | SAMN05216505_11097 | Signal transduction histidine kinase. | Uncharacterized protein. | 0.971 |
SAMN05216505_11095 | SAMN05216505_11098 | Signal transduction histidine kinase. | Uncharacterized protein. | 0.962 |
SAMN05216505_11095 | SAMN05216505_1152 | Signal transduction histidine kinase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.408 |
SAMN05216505_11095 | SAMN05216505_11926 | Signal transduction histidine kinase. | Signal recognition particle receptor subunit beta, a GTPase. | 0.694 |
SAMN05216505_11095 | SAMN05216505_12189 | Signal transduction histidine kinase. | Uncharacterized protein. | 0.726 |
SAMN05216505_11095 | SAMN05216505_1232 | Signal transduction histidine kinase. | 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. | 0.408 |
SAMN05216505_11095 | SAMN05216505_1261 | Signal transduction histidine kinase. | Uncharacterized protein. | 0.777 |
SAMN05216505_11096 | SAMN05216505_104205 | Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family. | Signal recognition particle receptor subunit beta, a GTPase. | 0.918 |
SAMN05216505_11096 | SAMN05216505_11095 | Predicted regulator of Ras-like GTPase activity, Roadblock/LC7/MglB family. | Signal transduction histidine kinase. | 0.969 |
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