Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
SAMN05216505_101418 | SAMN05216505_101664 | Transcriptional attenuator, LytR family. | Uncharacterized protein. | 0.750 |
SAMN05216505_101418 | SAMN05216505_104400 | Transcriptional attenuator, LytR family. | Xanthomonas XOO_2897-like deaminase. | 0.767 |
SAMN05216505_101418 | SAMN05216505_105208 | Transcriptional attenuator, LytR family. | Peptidase family M48. | 0.644 |
SAMN05216505_101418 | SAMN05216505_110191 | Transcriptional attenuator, LytR family. | Chromosome segregation ATPase. | 0.774 |
SAMN05216505_101418 | SAMN05216505_11041 | Transcriptional attenuator, LytR family. | Uncharacterized protein. | 0.765 |
SAMN05216505_101418 | SAMN05216505_114156 | Transcriptional attenuator, LytR family. | Uncharacterized protein. | 0.773 |
SAMN05216505_101418 | SAMN05216505_12416 | Transcriptional attenuator, LytR family. | Uncharacterized protein. | 0.530 |
SAMN05216505_101664 | SAMN05216505_101418 | Uncharacterized protein. | Transcriptional attenuator, LytR family. | 0.750 |
SAMN05216505_101664 | SAMN05216505_104400 | Uncharacterized protein. | Xanthomonas XOO_2897-like deaminase. | 0.772 |
SAMN05216505_101664 | SAMN05216505_105208 | Uncharacterized protein. | Peptidase family M48. | 0.665 |
SAMN05216505_101664 | SAMN05216505_110181 | Uncharacterized protein. | Uncharacterized protein. | 0.691 |
SAMN05216505_101664 | SAMN05216505_110191 | Uncharacterized protein. | Chromosome segregation ATPase. | 0.759 |
SAMN05216505_101664 | SAMN05216505_11041 | Uncharacterized protein. | Uncharacterized protein. | 0.757 |
SAMN05216505_101664 | SAMN05216505_114156 | Uncharacterized protein. | Uncharacterized protein. | 0.726 |
SAMN05216505_101664 | SAMN05216505_12416 | Uncharacterized protein. | Uncharacterized protein. | 0.563 |
SAMN05216505_104400 | SAMN05216505_101418 | Xanthomonas XOO_2897-like deaminase. | Transcriptional attenuator, LytR family. | 0.767 |
SAMN05216505_104400 | SAMN05216505_101664 | Xanthomonas XOO_2897-like deaminase. | Uncharacterized protein. | 0.772 |
SAMN05216505_104400 | SAMN05216505_105208 | Xanthomonas XOO_2897-like deaminase. | Peptidase family M48. | 0.632 |
SAMN05216505_104400 | SAMN05216505_110181 | Xanthomonas XOO_2897-like deaminase. | Uncharacterized protein. | 0.700 |
SAMN05216505_104400 | SAMN05216505_110191 | Xanthomonas XOO_2897-like deaminase. | Chromosome segregation ATPase. | 0.784 |
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