STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718025_01386Unannotated protein. (244 aa)    
Predicted Functional Partners:
GCA_000718025_01389
Unannotated protein.
 
     0.883
GCA_000718025_01387
Unannotated protein.
  
  
 0.833
GCA_000718025_01392
Unannotated protein.
 
   
 0.757
GCA_000718025_02638
Unannotated protein.
  
     0.747
GCA_000718025_05781
Unannotated protein.
 
  
 0.733
GCA_000718025_05718
Unannotated protein.
  
     0.722
GCA_000718025_05851
Unannotated protein.
  
     0.721
GCA_000718025_05517
Unannotated protein.
  
     0.719
GCA_000718025_04352
Unannotated protein.
  
     0.710
GCA_000718025_03345
Unannotated protein.
  
     0.706
Your Current Organism:
Kitasatospora purpeofusca
NCBI taxonomy Id: 67352
Other names: ATCC 23952, BCRC 12093, CBS 935.68, CCRC 12093, CCRC:12093, DSM 40283, IFO 12905, ISP 5283, JCM 4156, JCM 4665, K. purpeofusca, LMG 20283, LMG:20283, NBRC 12905, NCIMB 9822, NRRL-ISP 5283, NRRL-ISP:5283, Streptomyces purpeofuscus, Streptomyces purpureifuscus, strain H-5080, strain Yamaguchi H-5080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.