STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000718025_01980Unannotated protein. (221 aa)    
Predicted Functional Partners:
GCA_000718025_01981
Unannotated protein.
       0.773
GCA_000718025_01982
Unannotated protein.
       0.773
GCA_000718025_01979
Unannotated protein.
 
     0.726
GCA_000718025_02361
Unannotated protein.
  
 
  0.703
GCA_000718025_06024
Unannotated protein.
    
   0.626
GCA_000718025_02601
Unannotated protein.
  
     0.613
GCA_000718025_04170
Unannotated protein.
  
     0.534
GCA_000718025_01978
Unannotated protein.
 
     0.533
GCA_000718025_04297
Unannotated protein.
  
     0.477
GCA_000718025_06513
Unannotated protein.
  
     0.445
Your Current Organism:
Kitasatospora purpeofusca
NCBI taxonomy Id: 67352
Other names: ATCC 23952, BCRC 12093, CBS 935.68, CCRC 12093, CCRC:12093, DSM 40283, IFO 12905, ISP 5283, JCM 4156, JCM 4665, K. purpeofusca, LMG 20283, LMG:20283, NBRC 12905, NCIMB 9822, NRRL-ISP 5283, NRRL-ISP:5283, Streptomyces purpeofuscus, Streptomyces purpureifuscus, strain H-5080, strain Yamaguchi H-5080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.