STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO65438.1Two-component system, OmpR family, sensor histidine kinase SenX3. (388 aa)    
Predicted Functional Partners:
SEO65457.1
Two-component system, OmpR family, response regulator RegX3.
 0.997
SEP26530.1
Two-component system, OmpR family, response regulator.
 0.979
SEP25566.1
Anti-anti-sigma factor.
 
0.978
SEO71311.1
Two-component system, OmpR family, response regulator MtrA.
 0.957
SEO96943.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.952
SEP06838.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.948
SEP06731.1
Response regulator receiver domain-containing protein.
 0.945
SEO65417.1
Phosphate transport system protein; Plays a role in the regulation of phosphate uptake.
 
   
 0.930
SEO64830.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.912
SEP20590.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
   
 0.876
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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