Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO39510.1 | SEO65929.1 | SAMN05660991_00093 | SAMN05660991_01117 | Protein of unknown function. | Broad specificity phosphatase PhoE. | 0.767 |
SEO65851.1 | SEO65873.1 | SAMN05660991_01113 | SAMN05660991_01114 | uroporphyrinogen-III synthase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.999 |
SEO65851.1 | SEO65892.1 | SAMN05660991_01113 | SAMN05660991_01115 | uroporphyrinogen-III synthase. | Hypothetical protein. | 0.951 |
SEO65851.1 | SEO65929.1 | SAMN05660991_01113 | SAMN05660991_01117 | uroporphyrinogen-III synthase. | Broad specificity phosphatase PhoE. | 0.784 |
SEO65851.1 | SEO65947.1 | SAMN05660991_01113 | SAMN05660991_01118 | uroporphyrinogen-III synthase. | Peroxiredoxin. | 0.765 |
SEO65851.1 | SEO65967.1 | SAMN05660991_01113 | SAMN05660991_01119 | uroporphyrinogen-III synthase. | Cytochrome c-type biogenesis protein. | 0.880 |
SEO65851.1 | SEO65985.1 | SAMN05660991_01113 | SAMN05660991_01120 | uroporphyrinogen-III synthase. | Cytochrome c biogenesis protein. | 0.912 |
SEO65851.1 | SEP21228.1 | SAMN05660991_01113 | SAMN05660991_03943 | uroporphyrinogen-III synthase. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.882 |
SEO65851.1 | hemL | SAMN05660991_01113 | SAMN05660991_01116 | uroporphyrinogen-III synthase. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.983 |
SEO65873.1 | SEO65851.1 | SAMN05660991_01114 | SAMN05660991_01113 | Porphobilinogen synthase; Belongs to the ALAD family. | uroporphyrinogen-III synthase. | 0.999 |
SEO65873.1 | SEO65892.1 | SAMN05660991_01114 | SAMN05660991_01115 | Porphobilinogen synthase; Belongs to the ALAD family. | Hypothetical protein. | 0.794 |
SEO65873.1 | SEO65929.1 | SAMN05660991_01114 | SAMN05660991_01117 | Porphobilinogen synthase; Belongs to the ALAD family. | Broad specificity phosphatase PhoE. | 0.778 |
SEO65873.1 | SEO65947.1 | SAMN05660991_01114 | SAMN05660991_01118 | Porphobilinogen synthase; Belongs to the ALAD family. | Peroxiredoxin. | 0.745 |
SEO65873.1 | SEO65967.1 | SAMN05660991_01114 | SAMN05660991_01119 | Porphobilinogen synthase; Belongs to the ALAD family. | Cytochrome c-type biogenesis protein. | 0.788 |
SEO65873.1 | SEO65985.1 | SAMN05660991_01114 | SAMN05660991_01120 | Porphobilinogen synthase; Belongs to the ALAD family. | Cytochrome c biogenesis protein. | 0.674 |
SEO65873.1 | SEP21228.1 | SAMN05660991_01114 | SAMN05660991_03943 | Porphobilinogen synthase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.968 |
SEO65873.1 | hemL | SAMN05660991_01114 | SAMN05660991_01116 | Porphobilinogen synthase; Belongs to the ALAD family. | Glutamate-1-semialdehyde 2,1-aminomutase. | 0.997 |
SEO65892.1 | SEO65851.1 | SAMN05660991_01115 | SAMN05660991_01113 | Hypothetical protein. | uroporphyrinogen-III synthase. | 0.951 |
SEO65892.1 | SEO65873.1 | SAMN05660991_01115 | SAMN05660991_01114 | Hypothetical protein. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.794 |
SEO65892.1 | SEO65929.1 | SAMN05660991_01115 | SAMN05660991_01117 | Hypothetical protein. | Broad specificity phosphatase PhoE. | 0.809 |
page 1 of 4