Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEO66255.1 | SEO68638.1 | SAMN05660991_01134 | SAMN05660991_01268 | Isochorismate synthase. | Chorismate mutase. | 0.887 |
| SEO66255.1 | SEO92183.1 | SAMN05660991_01134 | SAMN05660991_02404 | Isochorismate synthase. | Nicotinamidase-related amidase. | 0.917 |
| SEO66255.1 | SEP12805.1 | SAMN05660991_01134 | SAMN05660991_03423 | Isochorismate synthase. | Anthranilate synthase, component II. | 0.939 |
| SEO66255.1 | SEP22553.1 | SAMN05660991_01134 | SAMN05660991_04048 | Isochorismate synthase. | acetoacetyl-CoA synthetase. | 0.879 |
| SEO66255.1 | SEP23775.1 | SAMN05660991_01134 | SAMN05660991_04175 | Isochorismate synthase. | Methyltransferase domain-containing protein. | 0.893 |
| SEO66255.1 | aroC | SAMN05660991_01134 | SAMN05660991_02516 | Isochorismate synthase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.924 |
| SEO66255.1 | menB | SAMN05660991_01134 | SAMN05660991_04040 | Isochorismate synthase. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.909 |
| SEO66255.1 | menD | SAMN05660991_01134 | SAMN05660991_01129 | Isochorismate synthase. | 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily. | 0.997 |
| SEO66255.1 | trpD | SAMN05660991_01134 | SAMN05660991_03667 | Isochorismate synthase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.883 |
| SEO66255.1 | trpE | SAMN05660991_01134 | SAMN05660991_02591 | Isochorismate synthase. | Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.856 |
| SEO68638.1 | SEO66255.1 | SAMN05660991_01268 | SAMN05660991_01134 | Chorismate mutase. | Isochorismate synthase. | 0.887 |
| SEO68638.1 | SEP12805.1 | SAMN05660991_01268 | SAMN05660991_03423 | Chorismate mutase. | Anthranilate synthase, component II. | 0.888 |
| SEO68638.1 | aroC | SAMN05660991_01268 | SAMN05660991_02516 | Chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.972 |
| SEO68638.1 | trpD | SAMN05660991_01268 | SAMN05660991_03667 | Chorismate mutase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.703 |
| SEO68638.1 | trpE | SAMN05660991_01268 | SAMN05660991_02591 | Chorismate mutase. | Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.910 |
| SEO92183.1 | SEO66255.1 | SAMN05660991_02404 | SAMN05660991_01134 | Nicotinamidase-related amidase. | Isochorismate synthase. | 0.917 |
| SEO92183.1 | trpE | SAMN05660991_02404 | SAMN05660991_02591 | Nicotinamidase-related amidase. | Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.777 |
| SEP12805.1 | SEO66255.1 | SAMN05660991_03423 | SAMN05660991_01134 | Anthranilate synthase, component II. | Isochorismate synthase. | 0.939 |
| SEP12805.1 | SEO68638.1 | SAMN05660991_03423 | SAMN05660991_01268 | Anthranilate synthase, component II. | Chorismate mutase. | 0.888 |
| SEP12805.1 | aroC | SAMN05660991_03423 | SAMN05660991_02516 | Anthranilate synthase, component II. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.926 |
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