STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO69782.1LAO/AO transport system kinase. (340 aa)    
Predicted Functional Partners:
SEO69780.1
Heterodimeric methylmalonyl-CoA mutase large subunit precursor.
  
 0.994
SEO69765.1
Heterodimeric methylmalonyl-CoA mutase small subunit.
  
 0.964
SEO91164.1
(R)-ethylmalonyl-CoA mutase.
  
 0.957
SEO91001.1
methylmalonyl-CoA epimerase.
     0.854
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
 
  
0.816
SEO69805.1
Alpha-1,6-mannosyltransferase.
       0.773
SEO69752.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.509
SEO69945.1
propionyl-CoA carboxylase carboxyltransferase subunit.
 
     0.462
SEO68729.1
methylmalonyl-CoA mutase, C-terminal domain.
  
  
 0.432
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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