STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO85110.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
SEO85126.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
 
   
 0.621
SEO85096.1
Transcriptional regulator, TetR family.
 
     0.587
SEO85058.1
Probable F420-dependent oxidoreductase, Rv2161c family.
 
     0.503
SEO86477.1
Probable F420-dependent oxidoreductase, MSMEG_2249 family.
  
     0.492
SEO82438.1
Transcriptional regulator, TetR family.
  
     0.447
SEO85081.1
Thioesterase-like superfamily protein.
       0.445
SEP10824.1
N-acyl-D-aspartate/D-glutamate deacylase.
 
     0.442
SEO44888.1
P-hydroxybenzoate 3-monooxygenase.
 
    0.425
SEO86497.1
Phosphotransferase enzyme family protein.
  
     0.425
SEP19487.1
Probable F420-dependent oxidoreductase, MSMEG_2256 family.
  
     0.425
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.