STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO90017.1Protein of unknown function. (174 aa)    
Predicted Functional Partners:
SEP21766.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.685
SEP12309.1
Hypothetical protein.
  
     0.666
SEO71343.1
Sporulation and spore germination.
  
     0.630
SEO91302.1
Hypothetical protein.
  
     0.620
SEO90604.1
ACT domain-containing protein.
  
     0.594
SEO77831.1
Hypothetical protein.
  
     0.559
SEO90004.1
AsnC family protein.
       0.559
thiL
Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.
       0.536
SEP14795.1
Hypothetical protein.
  
     0.536
SEO76348.1
DivIVA domain-containing protein.
 
     0.497
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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