STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO94361.1uroporphyrinogen-III synthase. (372 aa)    
Predicted Functional Partners:
SEP25566.1
Anti-anti-sigma factor.
  
 0.994
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
 
 0.991
SEP24812.1
uroporphyrinogen-III C-methyltransferase.
 
 
 0.986
hemC
Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 0.981
SEO65851.1
uroporphyrinogen-III synthase.
 
 
 0.934
SEP27680.1
Precorrin-3 methyltransferase.
    
 0.902
SEO46526.1
Cyclic nucleotide-binding domain-containing protein.
  
 0.900
SEO65873.1
Porphobilinogen synthase; Belongs to the ALAD family.
  
 0.896
SEP01903.1
Signal transduction histidine kinase.
  
 0.895
SEO42966.1
Sirohydrochlorin ferrochelatase.
 
 
 0.890
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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