STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO95638.1Predicted oxidoreductase. (284 aa)    
Predicted Functional Partners:
SEP13564.1
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
    
 0.577
SEO95620.1
Recombination protein MgsA.
       0.561
SEO45391.1
Pyridoxine kinase; Belongs to the pyridoxine kinase family.
    
  0.552
SEO99962.1
2,5-diketo-D-gluconate reductase A.
 
0.517
SEO40471.1
Aldo/keto reductase.
 
0.511
SEO95651.1
Hypothetical protein.
       0.464
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 
  0.429
SEO55587.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.412
SEP17487.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.412
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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