Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEP01407.1 | SEP01560.1 | SAMN05660991_02822 | SAMN05660991_02832 | Cytochrome P450. | Catechol 2,3-dioxygenase. | 0.436 |
SEP01407.1 | SEP01685.1 | SAMN05660991_02822 | SAMN05660991_02842 | Cytochrome P450. | Cupin domain-containing protein. | 0.737 |
SEP01407.1 | SEP01728.1 | SAMN05660991_02822 | SAMN05660991_02845 | Cytochrome P450. | P-cumate 2,3-dioxygenase beta subunit. | 0.847 |
SEP01407.1 | SEP01747.1 | SAMN05660991_02822 | SAMN05660991_02846 | Cytochrome P450. | Glyoxalase-like domain-containing protein. | 0.714 |
SEP01407.1 | SEP01787.1 | SAMN05660991_02822 | SAMN05660991_02849 | Cytochrome P450. | Taurine catabolism dioxygenase TauD, TfdA family. | 0.846 |
SEP01407.1 | SEP23446.1 | SAMN05660991_02822 | SAMN05660991_04132 | Cytochrome P450. | Hypothetical protein. | 0.661 |
SEP01560.1 | SEP01407.1 | SAMN05660991_02832 | SAMN05660991_02822 | Catechol 2,3-dioxygenase. | Cytochrome P450. | 0.436 |
SEP01560.1 | SEP01625.1 | SAMN05660991_02832 | SAMN05660991_02837 | Catechol 2,3-dioxygenase. | Catechol 2,3-dioxygenase. | 0.411 |
SEP01560.1 | SEP01685.1 | SAMN05660991_02832 | SAMN05660991_02842 | Catechol 2,3-dioxygenase. | Cupin domain-containing protein. | 0.759 |
SEP01560.1 | SEP01728.1 | SAMN05660991_02832 | SAMN05660991_02845 | Catechol 2,3-dioxygenase. | P-cumate 2,3-dioxygenase beta subunit. | 0.441 |
SEP01560.1 | SEP01747.1 | SAMN05660991_02832 | SAMN05660991_02846 | Catechol 2,3-dioxygenase. | Glyoxalase-like domain-containing protein. | 0.689 |
SEP01560.1 | SEP01787.1 | SAMN05660991_02832 | SAMN05660991_02849 | Catechol 2,3-dioxygenase. | Taurine catabolism dioxygenase TauD, TfdA family. | 0.703 |
SEP01560.1 | SEP23446.1 | SAMN05660991_02832 | SAMN05660991_04132 | Catechol 2,3-dioxygenase. | Hypothetical protein. | 0.723 |
SEP01625.1 | SEP01560.1 | SAMN05660991_02837 | SAMN05660991_02832 | Catechol 2,3-dioxygenase. | Catechol 2,3-dioxygenase. | 0.411 |
SEP01625.1 | SEP01685.1 | SAMN05660991_02837 | SAMN05660991_02842 | Catechol 2,3-dioxygenase. | Cupin domain-containing protein. | 0.761 |
SEP01625.1 | SEP01747.1 | SAMN05660991_02837 | SAMN05660991_02846 | Catechol 2,3-dioxygenase. | Glyoxalase-like domain-containing protein. | 0.662 |
SEP01625.1 | SEP01787.1 | SAMN05660991_02837 | SAMN05660991_02849 | Catechol 2,3-dioxygenase. | Taurine catabolism dioxygenase TauD, TfdA family. | 0.688 |
SEP01625.1 | SEP23446.1 | SAMN05660991_02837 | SAMN05660991_04132 | Catechol 2,3-dioxygenase. | Hypothetical protein. | 0.712 |
SEP01663.1 | SEP01675.1 | SAMN05660991_02840 | SAMN05660991_02841 | Dihydroorotase. | 4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family. | 0.814 |
SEP01663.1 | SEP01685.1 | SAMN05660991_02840 | SAMN05660991_02842 | Dihydroorotase. | Cupin domain-containing protein. | 0.883 |
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