STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP01685.1Cupin domain-containing protein. (135 aa)    
Predicted Functional Partners:
SEP01675.1
4-hydroxy-2-oxoheptanedioate aldolase; Belongs to the HpcH/HpaI aldolase family.
 
    0.884
SEP01663.1
Dihydroorotase.
 
     0.883
SEP01747.1
Glyoxalase-like domain-containing protein.
 
     0.777
SEP23446.1
Hypothetical protein.
  
     0.768
SEP01625.1
Catechol 2,3-dioxygenase.
 
     0.761
SEP01560.1
Catechol 2,3-dioxygenase.
 
     0.759
SEP01728.1
P-cumate 2,3-dioxygenase beta subunit.
  
     0.753
SEP01407.1
Cytochrome P450.
 
 
   0.737
SEP01787.1
Taurine catabolism dioxygenase TauD, TfdA family.
  
     0.721
SEP01699.1
Transcriptional regulator, IclR family.
 
   
 0.657
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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