STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP04804.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)    
Predicted Functional Partners:
SEO49072.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
   0.779
SEP19852.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
   0.779
SEO86599.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
   0.777
SEO49406.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.773
SEP05418.1
Short chain dehydrogenase.
  
     0.771
SEO54640.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
   0.764
SEP04823.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
    
  0.763
SEO96592.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.753
SEO48881.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
   0.747
SEP04890.1
SDR family mycofactocin-dependent oxidoreductase.
 
 
   0.715
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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