STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP04952.1Hypothetical protein. (252 aa)    
Predicted Functional Partners:
SEP04972.1
2-oxoisovalerate dehydrogenase E1 component.
  
    0.780
SEP04985.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
       0.773
SEP05005.1
Acyl-CoA dehydrogenase.
       0.718
SEP05022.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase.
       0.718
SEP13290.1
Competence/damage-inducible protein cinA; Belongs to the CinA family.
     
 0.654
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.555
SEP05038.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.547
SEO78422.1
Flagellar motor switch protein FliN/FliY.
   
   0.501
SEO43614.1
Anti-anti-sigma factor.
  
    0.482
SEO84045.1
Hypothetical protein.
  
 
 0.481
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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