STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP05809.1Uncharacterized membrane protein. (132 aa)    
Predicted Functional Partners:
SEO77682.1
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
      0.799
SEP05821.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family.
       0.639
SEP05781.1
Uncharacterized conserved protein, DUF427 family.
 
     0.511
SEP05835.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.468
SEP05850.1
crotonobetainyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.468
SEP05865.1
Probable F420-dependent oxidoreductase, Rv3520c family.
       0.468
SEP05882.1
Hypothetical protein.
 
     0.446
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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