STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP10720.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (258 aa)    
Predicted Functional Partners:
SEP10707.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
    0.763
SEP19442.1
Short-chain dehydrogenase.
  
 
  0.762
SEO84721.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
  0.746
SEP10745.1
Acyl-CoA dehydrogenase, C-terminal domain.
 
    0.689
SEP21758.1
caffeoyl-CoA O-methyltransferase.
 
      0.687
SEP01407.1
Cytochrome P450.
   
 0.684
SEP18307.1
[acyl-carrier-protein] S-malonyltransferase.
 
 0.647
SEP10734.1
Acyl-CoA dehydrogenase.
  
    0.636
SEP10763.1
Acyl-CoA dehydrogenase.
  
    0.636
SEP10774.1
Acyl-CoA dehydrogenase.
  
    0.636
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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