STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP17106.1Protein of unknown function. (202 aa)    
Predicted Functional Partners:
SEP17356.1
Protein of unknown function.
 
     0.779
SEO39510.1
Protein of unknown function.
  
     0.758
SEO65929.1
Broad specificity phosphatase PhoE.
  
     0.745
rbpA-2
RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.728
SEO97238.1
YggT family protein.
  
     0.713
SEO39566.1
Protein of unknown function.
  
     0.707
SEP02479.1
Hypothetical protein.
  
     0.705
SEO86095.1
MerR HTH family regulatory protein.
  
     0.703
SEP14788.1
Protein of unknown function.
  
     0.682
SEO72503.1
Putative hydrolase.
  
     0.680
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.