STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP17585.1Hypothetical protein. (230 aa)    
Predicted Functional Partners:
SEP17601.1
Hypothetical protein.
       0.629
SEO70956.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
 
     0.617
SEO70975.1
LPPG:FO 2-phospho-L-lactate transferase.
 
     0.557
SEP17580.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
       0.444
SEP17614.1
Probable F420-dependent oxidoreductase, Rv2161c family.
       0.442
SEO91760.1
Peptidase S24-like.
  
     0.441
SEP19549.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
    
  0.404
SEP26941.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
    
  0.404
mtnB
Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.
    
  0.404
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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