STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP19719.1Carbon-monoxide dehydrogenase small subunit. (181 aa)    
Predicted Functional Partners:
SEP19728.1
Carbon-monoxide dehydrogenase large subunit.
 0.997
SEP19704.1
Carbon-monoxide dehydrogenase medium subunit.
 0.994
SEP19408.1
Carbon-monoxide dehydrogenase large subunit.
 0.993
SEO40711.1
Carbon-monoxide dehydrogenase large subunit.
 0.992
SEP10383.1
Carbon-monoxide dehydrogenase large subunit.
 0.992
SEP29950.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.991
SEP25974.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.990
SEO83788.1
Carbon monoxide dehydrogenase, large subunit apoprotein.
 0.982
SEP00370.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 0.982
SEP19427.1
Carbon-monoxide dehydrogenase medium subunit.
 0.976
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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