STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP22340.1Acyl-CoA dehydrogenase. (404 aa)    
Predicted Functional Partners:
SEO90692.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.838
SEO90704.1
Electron transfer flavoprotein beta subunit.
 
 0.780
SEO39822.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.766
SEP20259.1
Acyl-CoA dehydrogenase.
  
     0.705
SEO59371.1
Acyl-CoA dehydrogenase.
  
     0.653
SEO54531.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.637
SEP20243.1
Acyl-CoA dehydrogenase.
 
     0.618
SEO74782.1
acyl-CoA dehydrogenase.
  
     0.615
SEO56927.1
Acyl-CoA dehydrogenase.
  
     0.609
SEO91164.1
(R)-ethylmalonyl-CoA mutase.
    
 0.607
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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