STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP23359.1Branched-chain amino acid transport system substrate-binding protein. (410 aa)    
Predicted Functional Partners:
SEP23367.1
Branched-chain amino acid ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.995
SEO82438.1
Transcriptional regulator, TetR family.
  
     0.705
SEP23373.1
Branched-chain amino acid transport system ATP-binding protein.
 
 
 0.704
SEP19975.1
Phosphotransferase enzyme family protein.
  
     0.692
SEO61924.1
Multiple antibiotic resistance protein.
  
     0.691
SEO75621.1
Urea transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.685
SEP10689.1
Transcriptional regulator, TetR family.
  
     0.676
SEO55063.1
Phosphotransferase enzyme family protein.
  
     0.652
SEO75658.1
Urea-binding protein.
  
  
  0.637
SEO75592.1
Urea transport system ATP-binding protein.
 
 
  0.635
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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