STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP27205.1Uncharacterized OB-fold protein, contains Zn-ribbon domain. (129 aa)    
Predicted Functional Partners:
SEP27215.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.917
SEP27175.1
Acetyl-CoA acetyltransferase.
 
  0.786
SEO49571.1
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
  0.761
SEP20058.1
Hypothetical protein.
 
   0.739
SEP23614.1
Acetyl-CoA acetyltransferase.
 
  0.720
SEP27195.1
Acyl dehydratase.
  
   0.702
SEP10582.1
Acetyl-CoA acetyltransferase.
 
  0.674
SEP10664.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
  
     0.657
SEP19975.1
Phosphotransferase enzyme family protein.
  
     0.647
SEO55063.1
Phosphotransferase enzyme family protein.
  
     0.623
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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