STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP28645.1Predicted oxidoreductase. (343 aa)    
Predicted Functional Partners:
SEP28656.1
Death on curing protein.
       0.566
SEP28663.1
Ribbon-helix-helix protein, copG family.
       0.566
SEP28639.1
Protein of unknown function.
       0.484
kynA
Tryptophan 2,3-dioxygenase holoenzyme; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
       0.459
SEO40471.1
Aldo/keto reductase.
  
0.456
SEO99962.1
2,5-diketo-D-gluconate reductase A.
  
0.456
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
  0.423
SEP28671.1
Hypothetical protein.
       0.413
SEO55587.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.412
SEP17487.1
Aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
   0.412
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.