STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP30028.1ABC-2 type transport system ATP-binding protein. (301 aa)    
Predicted Functional Partners:
SEP30021.1
Transcriptional regulator, GntR family.
  
 0.987
SEP30040.1
Hypothetical protein.
 
     0.946
SEP09414.1
ABC-2 type transport system permease protein.
  
 0.736
SEP30050.1
Polyhydroxybutyrate depolymerase.
       0.671
SEP25732.1
Hypothetical protein.
  
 0.657
SEP23367.1
Branched-chain amino acid ABC-type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
    
  0.618
SEO40304.1
ABC-2 type transport system permease protein.
 
 
 0.556
ureF
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
       0.519
ureC
Urease. Metallo peptidase. MEROPS family M38.
       0.519
SEP30002.1
Urease subunit beta.
       0.519
Your Current Organism:
Blastococcus endophyticus
NCBI taxonomy Id: 673521
Other names: B. endophyticus, Blastococcus endophyticus Zhu et al. 2013 emend. Hezbri et al. 2016, Blastococcus sp. YIM 68236, CCTCC AA 209045, DSM 45413, KCTC 19998, YIM 68236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.