STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001544075_00530Unannotated protein. (476 aa)    
Predicted Functional Partners:
GCA_001544075_01206
Unannotated protein.
 
 0.924
GCA_001544075_00996
Unannotated protein.
 
0.893
GCA_001544075_02834
Unannotated protein.
 
 0.857
GCA_001544075_03252
Unannotated protein.
 
 0.848
GCA_001544075_03998
Unannotated protein.
 
 0.848
GCA_001544075_00437
Unannotated protein.
 
  0.815
GCA_001544075_01207
Unannotated protein.
 
 
 0.772
GCA_001544075_02283
Unannotated protein.
 
0.757
GCA_001544075_04268
Unannotated protein.
 
0.755
GCA_001544075_01888
Unannotated protein.
 
0.737
Your Current Organism:
Comamonas terrae
NCBI taxonomy Id: 673548
Other names: C. terrae, Comamonas sp. A3-3, Comamonas terrae Chitpirom et al. 2012, NBRC 106524, strain A3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.