STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001544075_01874Unannotated protein. (193 aa)    
Predicted Functional Partners:
GCA_001544075_03164
Unannotated protein.
    
  0.840
GCA_001544075_00362
Unannotated protein.
    
  0.776
GCA_001544075_01170
Unannotated protein.
    
 0.741
GCA_001544075_00996
Unannotated protein.
    
 0.636
GCA_001544075_01873
Unannotated protein.
 
     0.615
GCA_001544075_00207
Unannotated protein.
  
 
 0.607
GCA_001544075_00833
Unannotated protein.
  
 
 0.607
GCA_001544075_01206
Unannotated protein.
   
 0.601
GCA_001544075_03107
Unannotated protein.
    
 
 0.581
GCA_001544075_01888
Unannotated protein.
   
 0.580
Your Current Organism:
Comamonas terrae
NCBI taxonomy Id: 673548
Other names: C. terrae, Comamonas sp. A3-3, Comamonas terrae Chitpirom et al. 2012, NBRC 106524, strain A3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.