STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001544075_03341Unannotated protein. (340 aa)    
Predicted Functional Partners:
GCA_001544075_01544
Unannotated protein.
 
  
 
0.938
GCA_001544075_01150
Unannotated protein.
  
 
 0.899
GCA_001544075_01461
Unannotated protein.
 
  
 
0.881
GCA_001544075_01787
Unannotated protein.
  
  
  0.881
GCA_001544075_01793
Unannotated protein.
  
  
  0.880
GCA_001544075_00132
Unannotated protein.
  
 
 0.874
GCA_001544075_00131
Unannotated protein.
  
 
 0.870
GCA_001544075_02949
Unannotated protein.
  
  
  0.856
GCA_001544075_00358
Unannotated protein.
0.844
GCA_001544075_00141
Unannotated protein.
  
  
 
0.842
Your Current Organism:
Comamonas terrae
NCBI taxonomy Id: 673548
Other names: C. terrae, Comamonas sp. A3-3, Comamonas terrae Chitpirom et al. 2012, NBRC 106524, strain A3-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.