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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUO01679.1Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)    
Predicted Functional Partners:
KUO01433.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
KUO01666.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.526
KUN94455.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
KUN94456.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.504
KUO01630.1
Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
KUO01027.1
Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.469
KUO01432.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.453
KUO01678.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.446
KUO01628.1
Squalene-hopene cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.436
KUO01686.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
Your Current Organism:
Streptomyces resistomycificus
NCBI taxonomy Id: 67356
Other names: ATCC 19804, BCRC 13755, CBS 556.68, CCRC 13755, CCRC:13755, DSM 40133, IFO 12814, ISP 5133, JCM 4409, NBRC 12814, NCIMB 9843, NRRL 2290, NRRL-ISP 5133, PCM 2296, S. resistomycificus, Streptomyces sp. USC032, UNIQEM 190
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.