STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUO01028.1Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (648 aa)    
Predicted Functional Partners:
KUN90921.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.953
KUN99261.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.917
KUO00921.1
3-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.896
KUO00920.1
NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.757
lnt-2
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.711
KUO00922.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.634
KUN90408.1
Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.629
KUO00918.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.624
KUO00565.1
Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.604
KUN93347.1
Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.582
Your Current Organism:
Streptomyces resistomycificus
NCBI taxonomy Id: 67356
Other names: ATCC 19804, BCRC 13755, CBS 556.68, CCRC 13755, CCRC:13755, DSM 40133, IFO 12814, ISP 5133, JCM 4409, NBRC 12814, NCIMB 9843, NRRL 2290, NRRL-ISP 5133, PCM 2296, S. resistomycificus, Streptomyces sp. USC032, UNIQEM 190
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