STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUN92729.1Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (642 aa)    
Predicted Functional Partners:
KUN92730.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.924
rplF
50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.771
KUN90575.1
Phosphopantetheine-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.761
KUN92728.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.753
KUN90567.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.703
KUN92727.1
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
   0.665
KUN95126.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.653
KUN91835.1
C-5 sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.561
KUN90823.1
ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.546
Your Current Organism:
Streptomyces resistomycificus
NCBI taxonomy Id: 67356
Other names: ATCC 19804, BCRC 13755, CBS 556.68, CCRC 13755, CCRC:13755, DSM 40133, IFO 12814, ISP 5133, JCM 4409, NBRC 12814, NCIMB 9843, NRRL 2290, NRRL-ISP 5133, PCM 2296, S. resistomycificus, Streptomyces sp. USC032, UNIQEM 190
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