STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPAR_24496Unannotated protein. (332 aa)    
Predicted Functional Partners:
SPAR_20068
Unannotated protein.
    
 
 0.905
SPAR_24491
Unannotated protein.
 
     0.834
SPAR_16840
Unannotated protein.
    
   0.778
SPAR_24486
Unannotated protein.
 
     0.777
SPAR_24481
Unannotated protein.
       0.738
SPAR_24471
Unannotated protein.
 
     0.737
SPAR_04206
Unannotated protein.
   
 
 0.665
SPAR_29451
Unannotated protein.
  
     0.606
SPAR_24476
Unannotated protein.
 
 
  0.583
SPAR_24501
Unannotated protein.
       0.497
Your Current Organism:
Streptomyces sparsogenes
NCBI taxonomy Id: 67365
Other names: ATCC 25498, BCRC 12085, CBS 672.69, CBS 958.69, CCRC 12085, CCRC:12085, DSM 40356, IFO 13086, ISP 5356, JCM 4517, LMG 5985, LMG:5985, NBRC 13086, NCIMB 9449, NRRL 2940, NRRL-ISP 5356, S. sparsogenes, Streptomyces sparsigenes, Streptomyces sparsogenes var. sparsognes
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.