STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK38_16135Unannotated protein. (561 aa)    
Predicted Functional Partners:
polA
Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
 
0.922
glyQS
Unannotated protein; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
 0.804
sbcD
Unannotated protein; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
   
 0.796
ADK38_45490
Unannotated protein.
   
 0.796
ADK38_01105
Unannotated protein.
 
 
 0.774
ADK38_43000
Unannotated protein.
   
 
 0.721
ADK38_20725
Unannotated protein.
   
 
 0.721
ADK38_33600
Unannotated protein.
   
 
 0.721
ADK38_46195
Unannotated protein.
    
  0.695
ADK38_04730
Unannotated protein; Belongs to the universal ribosomal protein uL1 family.
   
 
  0.689
Your Current Organism:
Streptomyces varsoviensis
NCBI taxonomy Id: 67373
Other names: ATCC 14631c, ATCC 25505, Actinomyces varsoviensis, BCRC 12647, CBS 357.64, CBS 647.69, CCRC 12647, CCRC:12647, DSM 40346, IFO 13093, IMET 43351, ISP 5346, JCM 4303, JCM 4523, NBRC 13093, NCIMB 9522, NRRL B-3589, NRRL-ISP 5346, S. varsoviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.