STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK38_43910Unannotated protein. (297 aa)    
Predicted Functional Partners:
ADK38_06485
Unannotated protein.
 
  0.987
ADK38_17885
Unannotated protein.
  
 
 0.841
ADK38_15510
Unannotated protein.
 
  0.767
ADK38_15515
Unannotated protein.
 
     0.704
ADK38_35465
Unannotated protein.
  
  0.627
ADK38_07170
Unannotated protein.
  
  0.626
ADK38_07180
Unannotated protein.
  
  0.604
ADK38_07165
Unannotated protein.
  
  0.599
ADK38_14275
Unannotated protein.
  
 0.595
ADK38_07175
Unannotated protein.
  
  0.595
Your Current Organism:
Streptomyces varsoviensis
NCBI taxonomy Id: 67373
Other names: ATCC 14631c, ATCC 25505, Actinomyces varsoviensis, BCRC 12647, CBS 357.64, CBS 647.69, CCRC 12647, CCRC:12647, DSM 40346, IFO 13093, IMET 43351, ISP 5346, JCM 4303, JCM 4523, NBRC 13093, NCIMB 9522, NRRL B-3589, NRRL-ISP 5346, S. varsoviensis
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.