Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADK38_03135 | ADK38_03205 | GCA_000718635_03070 | GCA_000718635_03067 | Unannotated protein. | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.873 |
ADK38_03135 | ADK38_13595 | GCA_000718635_03070 | GCA_000718635_03784 | Unannotated protein. | Unannotated protein. | 0.866 |
ADK38_03135 | ADK38_16430 | GCA_000718635_03070 | GCA_000718635_04667 | Unannotated protein. | Unannotated protein. | 0.965 |
ADK38_03135 | ADK38_21260 | GCA_000718635_03070 | GCA_000718635_05266 | Unannotated protein. | Unannotated protein. | 0.951 |
ADK38_03135 | ADK38_25030 | GCA_000718635_03070 | GCA_000718635_06870 | Unannotated protein. | Unannotated protein. | 0.977 |
ADK38_03135 | GCA_000718635_00531 | GCA_000718635_03070 | GCA_000718635_00531 | Unannotated protein. | Unannotated protein. | 0.999 |
ADK38_03135 | folD | GCA_000718635_03070 | GCA_000718635_06242 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.956 |
ADK38_03135 | gcvH-2 | GCA_000718635_03070 | GCA_000718635_03069 | Unannotated protein. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.999 |
ADK38_03135 | purH | GCA_000718635_03070 | GCA_000718635_06239 | Unannotated protein. | Unannotated protein. | 0.948 |
ADK38_03135 | purN | GCA_000718635_03070 | GCA_000718635_06238 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate. | 0.952 |
ADK38_03205 | ADK38_03135 | GCA_000718635_03067 | GCA_000718635_03070 | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Unannotated protein. | 0.873 |
ADK38_03205 | ADK38_16430 | GCA_000718635_03067 | GCA_000718635_04667 | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Unannotated protein. | 0.426 |
ADK38_03205 | ADK38_21260 | GCA_000718635_03067 | GCA_000718635_05266 | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Unannotated protein. | 0.876 |
ADK38_03205 | GCA_000718635_00531 | GCA_000718635_03067 | GCA_000718635_00531 | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Unannotated protein. | 0.750 |
ADK38_03205 | gcvH-2 | GCA_000718635_03067 | GCA_000718635_03069 | Unannotated protein; Belongs to the iron-sulfur dependent L-serine dehydratase family. | Unannotated protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.769 |
ADK38_13595 | ADK38_03135 | GCA_000718635_03784 | GCA_000718635_03070 | Unannotated protein. | Unannotated protein. | 0.866 |
ADK38_13595 | ADK38_16430 | GCA_000718635_03784 | GCA_000718635_04667 | Unannotated protein. | Unannotated protein. | 0.897 |
ADK38_13595 | ADK38_21260 | GCA_000718635_03784 | GCA_000718635_05266 | Unannotated protein. | Unannotated protein. | 0.878 |
ADK38_13595 | ADK38_25030 | GCA_000718635_03784 | GCA_000718635_06870 | Unannotated protein. | Unannotated protein. | 0.883 |
ADK38_13595 | GCA_000718635_00531 | GCA_000718635_03784 | GCA_000718635_00531 | Unannotated protein. | Unannotated protein. | 0.828 |
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