STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK38_42180Unannotated protein. (729 aa)    
Predicted Functional Partners:
ADK38_12150
Unannotated protein.
 
     0.900
ADK38_06135
Unannotated protein.
  
     0.765
ADK38_12670
Unannotated protein.
  
     0.742
ADK38_02775
Unannotated protein.
  
     0.732
ADK38_25075
Unannotated protein.
  
     0.726
GCA_000718635_01307
Unannotated protein.
  
     0.722
ADK38_09020
Unannotated protein.
  
     0.714
ADK38_28165
Unannotated protein.
  
     0.702
ADK38_16870
Unannotated protein.
  
     0.696
ADK38_40785
Unannotated protein.
  
     0.693
Your Current Organism:
Streptomyces varsoviensis
NCBI taxonomy Id: 67373
Other names: ATCC 14631c, ATCC 25505, Actinomyces varsoviensis, BCRC 12647, CBS 357.64, CBS 647.69, CCRC 12647, CCRC:12647, DSM 40346, IFO 13093, IMET 43351, ISP 5346, JCM 4303, JCM 4523, NBRC 13093, NCIMB 9522, NRRL B-3589, NRRL-ISP 5346, S. varsoviensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.